Deferrisoma

Deferrisoma
Scientific classification Edit this classification
Domain: Bacteria
Kingdom: Pseudomonadati
Phylum: Thermodesulfobacteriota
Class: Deferrisomatia
Waite et al. 2020[3]
Order: Deferrisomatales
Waite et al. 2020
Family: Deferrisomataceae
Waite et al. 2020
Genus: Deferrisoma
Slobodkina et al. 2012[1]
Type species
Deferrisoma camini
Slobodkina et al. 2012
Species[2]

Deferrisoma is a genus of bacteria from the phylum Thermodesulfobacteriota.[1][4] It is the only described member of the family Deferrisomataceae, order Deferrisomatales, and class Deferrisomatia. Known Deferrisoma species are thermophilic iron reducers that live on deep-sea and shallow hydrothermal vents.[5][6]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[2]

16S rRNA based LTP_10_2024[7][8][9] 120 marker proteins based GTDB 10-RS226[10][11][12]
Deferrisoma

D. camini Slobodkina et al. 2012

D. palaeochoriensePerez-Rodriguez et al. 2016

Deferrisoma

D. camini

See also

References

  1. ^ a b c Deferrisoma in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 53: D1–D12. doi:10.1093/nar/gkaf1110.
  2. ^ a b Schoch CL; et al. "Deferrisoma". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-06-05.
  3. ^ Waite DW, Chuvochina M, Pelikan C, Parks DH, Yilmaz P, Wagner M, Loy A, Naganuma T, Nakai R, Whitman WB, Hahn MW, Kuever J, Hugenholtz P. (2020). "Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major functional capabilities". Int J Syst Evol Microbiol. 70 (11): 5972–6016. doi:10.1099/ijsem.0.004213. PMID 33151140.
  4. ^ "Deferrisoma". www.uniprot.org.
  5. ^ Slobodkina, G. B.; Reysenbach, A.-L.; Panteleeva, A. N.; Kostrikina, N. A.; Wagner, I. D.; Bonch-Osmolovskaya, E. A.; Slobodkin, A. I. (2012-10-01). "Deferrisoma camini gen. nov., sp. nov., a moderately thermophilic, dissimilatory iron(III)-reducing bacterium from a deep-sea hydrothermal vent that forms a distinct phylogenetic branch in the Deltaproteobacteria". International Journal of Systematic and Evolutionary Microbiology. 62 (Pt_10): 2463–2468. doi:10.1099/ijs.0.038372-0. ISSN 1466-5026.
  6. ^ Pérez-Rodríguez, Ileana; Rawls, Matthew; Coykendall, D. Katharine; Foustoukos, Dionysis I. (2016-02-01). "Deferrisoma palaeochoriense sp. nov., a thermophilic, iron(III)-reducing bacterium from a shallow-water hydrothermal vent in the Mediterranean Sea". International Journal of Systematic and Evolutionary Microbiology. 66 (2): 830–836. doi:10.1099/ijsem.0.000798. ISSN 1466-5026.
  7. ^ "The LTP". Retrieved 10 December 2024.
  8. ^ "LTP_all tree in newick format". Retrieved 10 December 2024.
  9. ^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  10. ^ "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.
  11. ^ "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.
  12. ^ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.
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