Search Results: Bioperl

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BioPerl
Jumat, 2025-12-26 14:01:16

BioPerl is a collection of Perl modules that facilitate the development of Perl scripts for bioinformatics applications. It has played an integral role...

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Open Bioinformatics Foundation
Selasa, 2026-03-03 08:37:39

Bioinformatics Foundation was started in 2001, arising from the BioJava, BioPerl and BioPython projects. A formal membership for the foundation was created...

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Fixation index
Rabu, 2025-09-24 06:03:46

Archived 2015-03-29 at the Wayback Machine VCFtools DnaSP Popoolation2 BioPerl BioPython Peter Beerli, Estimation of migration rates and population sizes...

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Perl
Selasa, 2026-06-02 18:59:51

Perl Things CPAN Perl Foundation archives module Perl VM YAPC Frameworks BioPerl Catalyst Dancer DBI DBIx::Class LWP Mojolicious Moose Plack PSGI Template...

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Raku (programming language)
Minggu, 2026-03-01 20:09:42

Perl Things CPAN Perl Foundation archives module Perl VM YAPC Frameworks BioPerl Catalyst Dancer DBI DBIx::Class LWP Mojolicious Moose Plack PSGI Template...

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Lincoln Stein
Senin, 2026-03-16 13:33:33

data resources, including the Generic Model Organism Database project, BioPerl, WormBase, and the Reactome pathway database. His work has also contributed...

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Biopython
Rabu, 2026-04-29 15:39:18

bioinformatics capabilities to their respective programming languages, including BioPerl, BioRuby and BioJava. Early developers on the project included Jeff Chang...

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ACE (genomic file format)
Kamis, 2022-02-10 06:01:29

(more specifically Minimo) and Tigr Assembler v2. ACE format specification BioPerl IO module for ACE Contig representation in several assembly formats v t...

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Outline of biotechnology
Rabu, 2025-10-22 17:36:48

Robert Langer Index of biotechnology articles Earth BioGenome Project BioPerl, BioJava, BioJS, Biopython, BioRuby - libraries and modules that facilitate...

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List of Perl software and tools
Sabtu, 2026-01-24 11:30:31

basic statistics module BioMOBY — bioinformatics web services platform BioPerl — bioinformatics AI::Perceptron — simple neural network implementation...

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Bioinformatics
Senin, 2026-06-01 01:05:26

integration. Open-source bioinformatics software includes Bioconductor, BioPerl, Biopython, BioJava, BioJS, BioRuby, Bioclipse, EMBOSS, .NET Bio, Orange...

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FASTQ format
Rabu, 2026-04-01 01:24:46

6.1.0 patch 1 onwards (interconverts Sanger, Solexa and Illumina 1.3+) BioPerl version 1.6.1 onwards (interconverts Sanger, Solexa and Illumina 1.3+)...

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List of open-source code libraries
Selasa, 2026-05-12 08:43:05

Torch Lua MIT Flux Julia MIT Owl Scientific Computing OCaml, C Apache 2.0 BioPerl Perl GPL-1.0 CPAN Perl Artistic-1.0 CGI.pm Perl Artistic License 2.0 or...

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List of free and open-source software packages
Kamis, 2026-05-28 08:57:01

operational risk management and rapid application development platform Biopython BioPerl BioRuby BioJava COPASI Systems Biology Simulation Core Library Virtual...

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Tajima's D
Jumat, 2025-10-03 02:09:21

Bio::PopGen::Statistics Archived 2014-02-22 at the Wayback Machine in BioPerl A video explanation of Tajima's D, and its application to DNA sequences...

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Ewan Birney
Jumat, 2026-05-15 17:43:56

contributed to several other projects including the Pfam database, InterPro, BioPerl, and HMMER and Ensembl genome database project. As of 2015[update], Birney's...

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Steven E. Brenner
Selasa, 2025-09-30 20:54:21

; Stein, L. D.; Stupka, E.; Wilkinson, M. D.; Birney, E. (2002). "The BioPerl Toolkit: Perl Modules for the Life Sciences". Genome Research. 12 (10):...

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List of open-source bioinformatics software
Jumat, 2026-02-06 20:47:29

Registry of web services Web browser Artistic Open Bioinformatics Foundation BioPerl Perl language toolkit Cross-platform Artistic, GPL Open Bioinformatics...

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BioJS
Rabu, 2025-12-24 02:28:45

open-source software portal Biology portal BioJava, Biopython, BioRuby, BioPHP, BioPerl, Bioconductor Open Bioinformatics Foundation Corpas; Jimenez, Rafael; Carbon...

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BioJava
Minggu, 2026-05-10 23:43:38

of such projects that fall under Bio* apart from BioJava are BioPython, BioPerl, BioRuby, EMBOSS etc. In October 2012, the first paper on BioJava was published...

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Earth BioGenome Project
Jumat, 2026-01-30 02:10:37

sample collection and processing. AlphaFold - deep learning protein folding BioPerl, BioJava, BioJS, Biopython, BioRuby - libraries and modules that facilitate...

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BioRuby
Rabu, 2025-12-24 02:22:19

Katayama as a Ruby implementation of similar bioinformatics packages such as BioPerl and BioPython. The initial release of version 0.1 was frequently updated...

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List of sequence alignment software
Minggu, 2026-05-24 18:03:33

Biostrings::pairwiseAlignment Dynamic programming Both Both + Ends-free P. Aboyoun 2008 BioPerl dpAlign Dynamic programming Both Both + Ends-free Y. M. Chan 2003 BLASTZ...

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Sequence alignment
Kamis, 2026-03-12 03:17:59

provide this conversion functionality, such as BioPython, BioRuby and BioPerl. The SAM/BAM files use the CIGAR (Compact Idiosyncratic Gapped Alignment...

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BioPHP
Senin, 2025-12-22 21:49:01

a PHP-based implementation of similar bioinformatics packages such as BioPerl and BioPython and BioRuby. BioPHP was developed in December 2005 by Joseba...

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Suzanna Lewis
Minggu, 2026-01-18 07:06:37

Sciences 2012". Archived from the original on 2013-01-12. "Suzi Lewis - BioPerl". Archived from the original on 2012-02-05. "Berkeley Drosophila Genome...

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Outline of the Perl programming language
Rabu, 2026-05-13 03:40:08

include AWK and Perl. Anti-Spam SMTP Proxy AxKit BackupPC Big Medium BioMOBY BioPerl Bonsai Bricolage Catalyst CGIProxy cPanel Cowsay Dada Mail Dancer Debian...

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BioSLAX
Minggu, 2025-01-26 13:20:51

has many useful basic tools and applications such as: Perl (including BioPerl modules) PHP APACHE II MySQL OpenOffice.org KPDF Reader Mozilla Firefox...

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Generic Model Organism Database
Selasa, 2025-08-12 16:11:37

contributing to and/or adopting GMOD components for model organism databases. Bioperl, BioJava, Biopython, BioRuby, etc. Ensembl Gene Ontology DAS Genomics Unified...

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